Molecular Diagnostics in Transfusion Medicine: MALDI-TOF MS for Blood Bankers- The Alternative Approach for Genotyping
نویسنده
چکیده
Serology, defined as antibody-based diagnostics, has been held as the analytical gold standard in transfusion medicine. However, at the present time, the influence of molecular diagnostics in transfusion medicine is rapidly growing. These methods can improve tissue typing (HLA typing), increase safety of blood products (NAT testing of infectious diseases), and enable blood group typing in difficult circumstances (prenatal non-invasive RhD typing and/or post-transfusion of blood products). Generally speaking, molecular testing involves determining the presence of single nucleotide polymorphisms (SNPs). Blood group antigens mostly result from single nucleotide differences in critical positions. However, most blood group systems cannot be determined by looking at a single SNP. To identify members of a blood group system, a number of critical SNPs have to be considered. Current platforms used to perform molecular diagnostics are predominantly gel-based, involving time-consuming multiple manual steps. To employ molecular methods in transfusion medicine in the future, the development of higher-throughput SNP genotyping, non-gel based platforms that allow rapid, costeffective screening are essential. Because of its potential for automation, high throughput and cost effectiveness, the special focus of this review is a relatively new technique: blood group genotyping by MALDI-TOF MS. Although matrix-assisted laser desorption/ionisation, time-of-flight mass spectrometry (MALDI-TOF MS) has been previously reported for high throughput blood group genotyping, those reports are limited to only a few blood group systems. This report is timely as promising preliminary results have recently been published from a large cooperative Swiss-German project that aimed to employ MALDI-TOF MS for the molecular detection of the blood groups Rh, Kell, Kidd, Duffy, MNSs, a comprehensive collection of low incidence antigens, as well as the platelet and granulocyte antigens HPA and HNA, representing a total of 101 blood group antigens, encoded by 170 alleles, respectively. From this report, the observed success rates, data quality and concordance with known blood group types are highly impressive, underlining the accuracy and reliability of this cost-efficient high throughput method. Furthermore, Kell and RhD genotyping have been performed on foetal DNA from maternal plasma with excellent results. Additionally, current reports describe MALDI-TOF MS as a technology with short time-to-resolution, ability for high throughput, and cost efficiency when used in genetic analysis, clinical chemistry, microbiology, pharmaco-genetics, oncology and haematology. In summary, this paper examines a new technological approach for high throughput blood group genotyping by means of MALDI-TOF MS.
منابع مشابه
Molecular Diagnostics in Transfusion Medicine: In Capillary, on a Chip, in Silico, or in Flight?
Serology, defined as antibody-based diagnostics, has been regarded as the diagnostic gold standard in transfusion medicine. Nowadays however the impact of molecular diagnostics in transfusion medicine is rapidly growing. Molecular diagnostics can improve tissue typing (HLA typing), increase safety of blood products (NAT testing of infectious diseases), and enable blood group typing in difficult...
متن کاملMALDI-TOF MS in Prenatal Genomics.
Prenatal diagnosis aims either to provide the reassurance to the couples at risk of having an affected child by timely appropriate therapy or to give the parents a chance to decide the fate of the unborn babies with health problems. Invasive prenatal diagnosis (IPD) is accurate, however, carrying a risk of miscarriage. Non-invasive prenatal diagnosis (NIPD) has been developed based on the exist...
متن کاملGenotools SNP manager: a new software for automated high-throughput MALDI-TOF mass spectrometry SNP genotyping.
Analysis of single nucleotide polymorphisms (SNPs) is a rapidly growing field of research that provides insights into the most common type of differences between individual genomes. The resulting information has a strong impact in the fields of pharmacogenomics, drug development, forensic medicine, and diagnostics of specific disease markers. The technique of matrix-assisted laser desorption/io...
متن کاملCharacteristics of Potential Protein Biomarkers Extracted with 10% TCA from Blood Serum of Non-Hodgkin’s Lymphoma and Multiple Myeloma Patients
Blood serum has been extensively explored as a source of the bio-markers [1, 2]. For concentration of minor protein(s) and depletion of abundant blood serum proteins a 2,2,2-trichloroacetic acid (TCA) precipitation procedure is frequently applied [3]. However, a significant amount of proteins may be present in the TCA extracts, and these proteins are often not studied.Recently, we have sh...
متن کاملIdentification of Candida species isolated from vulvovaginitis in Mashhad, Iran by Use of MALDI-TOF MS
Background and Purpose Vulvovaginal candidiasis (VVC) is a common problem in women. The purpose of this study was to identify of Candida species isolated from vulvovaginitis woman suffering vulvovaginitis refered to Ghaem Hospital, Mashhad, Iran, by use of MALDI-TOF mass spectrometry. Materials and Methods The 65 clinical samples isolated from Vulvovaginitis women were collected in...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2014